VISDB - VIS Curation

Basic Information

VIS ID

TVIS10006236

Fusion name

HBV-DLC1 integration

State

Not Validated

Fusion type

Deatction Method

PCR and Ultra-deep sequencing

Curated Way

Curated

Sample

Tumor

Disease

Hepatocellular carcinoma

Quality evaluation

Normal

Reported year

2018

Pubmed ID

29861854

Virus Sequence

Virus name

Subtype

Reference genome

AP011098 Edit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Target gene

DLC1

Nearest cancer gene

DLC1(TSG, No orient, 0)

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

Junction sequence preview

CTGT

* Color: Human Sequence / Virus Sequence / Overlapped sequence / Unknown sequence

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