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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
Nearby gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10006627
Basic Information
VIS ID
TVIS10006627
Fusion name
HBV-chr5 integration
State
Validated
Fusion type
Deatction Method
invPCR +Sequencing
Curated Way
Curated
Sample
Tumor
Disease
Hepatocellular carcinoma
Quality evaluation
Normal
Reported year
2016
Pubmed ID
27453547
Virus Sequence
Virus name
Subtype
Reference genome
V01460.1
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh38
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Start
End
Orient
Location type
Nearby gene
LINC01947
(+940516) ;
Target sequence
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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