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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10011784
Basic Information
VIS ID
TVIS10011784
Fusion name
HBV-SLC14A2 integration
State
Not Validated
Fusion type
Deatction Method
NGS
Curated Way
Curated
Sample
Nontumor
Disease
Hepatocellular carcinoma
Quality evaluation
Normal
Reported year
2018
Pubmed ID
30271481
Virus Sequence
Virus name
Subtype
Reference genome
NC_003977
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
GGGGTCGCTTGGGACTCTCTCGTCCCCTTCTCCGTCTGCCGTTCCGACCGACCACGGGGCGCACCTCTCTTTACGCGGACTCCCCGTCTGTGCCTTCTCA| |TCTGCCGGACCGTGTGCACTTCGCTTCACCTCTGCACGTCGCATGGAGACCACCGTGAACGCCCACCAAATATTGCCCAAGGTCTTACATAAGAGGACTC
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
Edit
Start
End
Orient
Location type
Target gene
SLC14A2
Target sequence
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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