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Curation
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Oncogene
Tumor suppressor gene
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Host2Host
Host2Virus
Virus2Host
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Host2Host
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Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10015677
Basic Information
VIS ID
TVIS10015677
Fusion name
HBV-FBXL17 integration
State
Not Validated
Fusion type
Deatction Method
MAPS
Curated Way
Curated
Sample
Adjacent tissue
Disease
Hepatocellular carcinoma
Quality evaluation
Perfect
Reported year
2012
Pubmed ID
23236287
Virus Sequence
Virus name
Subtype
Reference genome
AY800389.1;AY800390.1;AY800391.1;AY800392.1
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
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Start
End
Orient
Location type
Fragile sites / regions
FRA5F
Target gene
FBXL17
Target sequence
Junction sequence
TCCTAAAGTTTATTTAGAAATTCACCAAGCCACATACTTATGCCTACAGCCTCCTAGTACATAAATCTTTAACCTAATCTCCTCCCCC
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
Junction sequence preview
TCCTAAAGTTTATTTAGAAATTCACCAAGCCACATACTTATGCCTACAGCCTCCTAGTACATAAATCTTTAACCTAATCTCCTCCCCC
* Color:
Human Sequence
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Virus Sequence
/
Overlapped sequence
/
Unknown sequence
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