Home
Browse
Prime browse
Clustered VIS browse
Search
Curation
Gene
Target gene
All
Oncogene
Tumor suppressor gene
Nearby gene
All
Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
Download
Statistics
Help
VISDB
Viral Integration Site DataBase
Homepage
My curation
TVIS10016231
Basic Information
VIS ID
TVIS10016231
Fusion name
HBV-chr11 integration
State
Not Validated
Fusion type
Deatction Method
RNA-Seq
Curated Way
Curated
Sample
Nontumor
Disease
Hepatocellular carcinoma
Quality evaluation
Good
Reported year
2012
Pubmed ID
22267523
Virus Sequence
Virus name
Subtype
Reference genome
NC_003977
Edit
Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
AGGCTGTAGGCATAAATTGGTCTGCGCAC
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
Edit
Start
End
Orient
Location type
Fragile sites / regions
FRA11H
Nearby gene
KAT5
(+1035) ;
Nearest cancer gene
KAT5
(TSG, +1035) ;
Target sequence
gacagggtttcaccgtgttggccaggatggtctcaatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattataggcgtgagccaccgcgcccagccgttttgtcccattattttagatgccaagaacctgtacaccctccacc
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
Please provide your email address for further verification:
Please provide any information about this curation.
Submit Curation
Edit link
×
Link name:
URL:
Please provide a valid, complete URL.