Home
Browse
Prime browse
Clustered VIS browse
Search
Curation
Gene
Target gene
All
Oncogene
Tumor suppressor gene
Nearby gene
All
Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
Download
Statistics
Help
VISDB
Viral Integration Site DataBase
Homepage
My curation
TVIS10017059
Basic Information
VIS ID
TVIS10017059
Fusion name
HBV-LOC105377732 integration
State
Not Validated
Fusion type
Deatction Method
Capture-NGS platform
Curated Way
Curated
Sample
Tumor
Disease
Hepatocellular carcinoma
Quality evaluation
Good
Reported year
2019
Pubmed ID
30070724
Virus Sequence
Virus name
Subtype
Reference genome
NC_003977
Edit
Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
TACACACTCTATGGAAGGCGGGTATATTATATAAGAGAGAAACAACACATAGCGCCTCATTTTGTGGGTCACCATATTCTTGGGAACAAGATCTA
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
Edit
Start
End
Orient
Location type
Fragile sites / regions
FRA5G
Target gene
LOC105377732
Target sequence
gtgttgaataggagcggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtt
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
Please provide your email address for further verification:
Please provide any information about this curation.
Submit Curation
Edit link
×
Link name:
URL:
Please provide a valid, complete URL.