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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10017433
Basic Information
VIS ID
TVIS10017433
Fusion name
AAV2-CCNA2 integration
State
Not Validated
Fusion type
Deatction Method
WGS
Curated Way
Curated
Sample
Tumor
Disease
Hepatocellular carcinoma
Quality evaluation
Good
Reported year
2018
Pubmed ID
30531861
Virus Sequence
Virus name
Subtype
Reference genome
AF043303.1
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
CAAGTCTGTTAATGTGGACTTTACTGTGGACACTAATGGCGTGTATTCAGAGCCTCGCCCCATTGGCACCAGATACCTGACTCGTAATCTGTAATTGCTTGTTAATCAATAAACCGTTTAATTCGTTTCAGTTGAACTTTGGTCTCTGCGTATTTCTTTCTTATCTAGTTTCCATGGCTACGTAGATAAGTAGCATGGCGGGTTAATCATTAACTACAAGGAACCCCTAGTGATGGAGTTGGCCACTCCCTCTCT
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
Edit
Start
End
Orient
Location type
Target gene
CCNA2
Target sequence
TAGTCTTGC
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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