VISDB - VIS Curation

Basic Information

VIS ID

TVIS10018271

Fusion name

HBV-chr1 integration

State

Not Validated

Fusion type

Deatction Method

RNA-Seq

Curated Way

Curated

Sample

Nontumor

Disease

Hepatocellular carcinoma

Quality evaluation

Good

Reported year

2017

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

Not givenEdit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Target gene

DYRK3 ; FCMR ; IL10 ; IL19 ; IL20 ; IL24 ; LGTN ; MAPKAPK2 ; PIGR ; RASSF5

Nearest cancer gene

RASSF5(TSG, No orient, 0)

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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