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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
Nearby gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10018830
Basic Information
VIS ID
TVIS10018830
Fusion name
HBV-RALGAPB integration
State
Not Validated
Fusion type
Deatction Method
VirusFinder
Curated Way
Curated
Sample
Nontumor
Disease
Hepatocellular carcinoma
Quality evaluation
Normal
Reported year
2017
Pubmed ID
29212479
Virus Sequence
Virus name
Subtype
Reference genome
NC_003977
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
AAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGGTTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGC| |ACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTTGTTCATGTCCTACTGTTCAAGCCTCCAAGCTGTGCCTTGGGTGGCTTTGGGGCATGGACATCG
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37.55
Edit
Start
End
Orient
Location type
Target gene
RALGAPB
Target sequence
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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