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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
Nearby gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS10020106
Basic Information
VIS ID
TVIS10020106
Fusion name
HBV-chr18:q23 integration
State
Validated
Fusion type
Deatction Method
Alu PCR
Curated Way
Curated
Sample
Tumor
Disease
Hepatocellular carcinoma
Quality evaluation
Normal
Reported year
2013
Pubmed ID
22989571
Virus Sequence
Virus name
Subtype
Reference genome
U95551.1
Edit
Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
ACCTCTGCACGTCGCATGGAGACCACCGTGAACGCCCACCGAATGTTGCCCAAGGTCTTACATAAGAGGACTCTTGGACTCTCTGCAATGTCAACGACCGACCTTGAGGCATACTTCAAAGACTGTTTGTTTAAAGACTGGGAGGAGTTGGGGGAGGAGATTAGATTAAAGGTCTTTGTACTAGGAGGCTGTAGGCATAAATTGGTCTGCGCACCAGCACCATGCAACTTTTTCACCTCTGCCTAATCATCTCTT
Host Sequence
Chromosome
Cytoband
Reference genome
Not given
Edit
Start
End
Orient
Location type
Nearby gene
PARD6G
(+3743) ;
Target sequence
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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