VISDB - VIS Curation

Basic Information

VIS ID

TVIS20000186

Fusion name

HPV-chr21:q22.11 integration

State

Not Validated

Fusion type

Deatction Method

HIVID

Curated Way

Curated

Sample

Tumor

Disease

Squamous-cell carcinoma

Quality evaluation

Normal

Reported year

2015

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

NC_001526.2;AY262282.1;EF202167.1Edit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Nearby gene

OR7E23P(-2305) ; SYNJ1(+4410) ;

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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