VISDB - VIS Curation

Basic Information

VIS ID

TVIS20003334

Fusion name

HPV-PRKCA integration

State

Not Validated

Fusion type

Deatction Method

HIVID

Curated Way

Curated

Sample

Tumor

Disease

Not given

Quality evaluation

Normal

Reported year

2015

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

HE574705.1;NC_001526.2;AY262282.1;HQ537777.1;EU918767.1Edit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Target gene

Nearest cancer gene

PRKCA(OG, No orient, 0)

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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