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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
Nearby gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS20003963
Basic Information
VIS ID
TVIS20003963
Fusion name
HPV-chr9:p24.1 integration
State
Not Validated
Fusion type
Deatction Method
RNA-Seq
Curated Way
Curated
Sample
Tumor
Disease
Head and neck squamous cell carcinoma
Quality evaluation
Normal
Reported year
2018
Pubmed ID
28928286
Virus Sequence
Virus name
Subtype
Reference genome
Not given
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
Edit
Start
End
Orient
Location type
Nearby gene
RIC1
(-49295) ;
Target sequence
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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