VISDB - VIS Curation

Basic Information

VIS ID

TVIS20004158

Fusion name

HPV-LINC00486 integration

State

Validated

Fusion type

Deatction Method

APOT and sequencing

Curated Way

Curated

Sample

Cell line

Disease

Cervical carcinoma

Quality evaluation

Good

Reported year

2018

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

AF125673.1 Edit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Target gene

Nearby gene

TTC27(-95303) ; LOC100271832(+10542) ;

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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