VISDB - VIS Curation

Basic Information

VIS ID

TVIS20004413

Fusion name

HPV-chr17:q21.2 integration

State

Validated

Fusion type

Deatction Method

DIPS-PCR

Curated Way

Curated

Sample

Tumor

Disease

Oropharyngeal squamous cell carcinoma

Quality evaluation

Normal

Reported year

2014

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

NC_001526.1 Edit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

Start

End

Orient

Location type

Nearby gene

MIR6510(-773) ; KRT19(+920) ;

Nearest cancer gene

KRT19(TSG, +920) ;

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

Please provide your email address for further verification: