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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
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Host2Host
Host2Virus
Virus2Host
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Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS20004436
Basic Information
VIS ID
TVIS20004436
Fusion name
HPV-FANCC integration
State
Validated
Fusion type
Deatction Method
APOT-PCR
Curated Way
Curated
Sample
Tumor
Disease
Oropharyngeal squamous cell carcinoma
Quality evaluation
Normal
Reported year
2014
Pubmed ID
24586376
Virus Sequence
Virus name
Subtype
Reference genome
NC_001526.1
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37.p5
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Start
End
Orient
Location type
Target gene
FANCC
Target sequence
GCAGTACCAGTAACAATTCCAAATAGGGTTTTTGGTGGAACTTCAGAAGCTTTTCCAAAATTCACATGGAGAAGCAAGGGGCCAAGAACAGCACATGCT
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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