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Curation
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Oncogene
Tumor suppressor gene
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Oncogene
Tumor suppressor gene
MicroRNA
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ncRNA
Host2Host
Host2Virus
Virus2Host
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Host2Host
Host2Virus
Virus2Host
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Host2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS20004487
Basic Information
VIS ID
TVIS20004487
Fusion name
HPV-PID1 integration
State
Validated
Fusion type
Deatction Method
Multiplex RT-PCR, APOT assay
Curated Way
Curated
Sample
Tumor
Disease
Cervical carcinoma
Quality evaluation
Normal
Reported year
2014
Pubmed ID
23824673
Virus Sequence
Virus name
Subtype
Reference genome
K02718
Edit
Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
AGTTGTTGCACAGAGACTCAGTGGACAGTGCTCCAATCCTCACTGCATTTAAC AGCTCACACAAAGGACGGATTAACTGTAATAGTAACACTACACCCA| |TAGTACATTTAAAAGGTGATGCTA ATACTTTAAAATGTTTAAGATATAGATTTAAAAAGCATTGTACATTGTATACTGCAGTGTCGTCTACATG GCAT
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
Edit
Start
End
Orient
Location type
Target gene
PID1
Target sequence
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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