VISDB - VIS Curation

Basic Information

VIS ID

TVIS30000135

Fusion name

HIV-HIF1A integration

State

Validated

Fusion type

Deatction Method

dd-PCR+WGA

Curated Way

download(RID)

Sample

PBMC

Disease

HIV-infected disease

Quality evaluation

Normal

Reported year

2019

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Fragile sites / regions

Target gene

Nearest cancer gene

HIF1A(TSG, No orient, 0)

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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