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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
Nearby gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS30000660
Basic Information
VIS ID
TVIS30000660
Fusion name
HIV-SCMH1 integration
State
Not Validated
Fusion type
Deatction Method
QiaQuick PCR and Sequencing
Curated Way
download(RID)
Sample
Cell line
Disease
HIV-infected disease
Quality evaluation
Normal
Reported year
2016
Pubmed ID
26912621
Virus Sequence
Virus name
Subtype
Reference genome
K03455.1
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37/hg19
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Start
End
Orient
Location type
Target gene
SCMH1
Target sequence
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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