VISDB - VIS Curation

Basic Information

VIS ID

TVIS30000961

Fusion name

HIV-chr11 integration

State

Validated

Fusion type

Deatction Method

QiaQuick PCR and Sequencing

Curated Way

Curated

Sample

PBMC

Disease

HIV-infected disease

Quality evaluation

Good

Reported year

2014

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

Not givenEdit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Fragile sites / regions

Nearby gene

NEAT1(No orient, 3473)

Nearest cancer gene

NEAT1(OG, No orient, 3473)

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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