VISDB - VIS Curation

Basic Information

VIS ID

TVIS30001596

Fusion name

HIV-RAP1A integration

State

Not Validated

Fusion type

Deatction Method

QiaQuick PCR and Sequencing

Curated Way

download(RID)

Sample

Cell line

Disease

HIV-infected disease

Quality evaluation

Normal

Reported year

2013

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

Not givenEdit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Target gene

Nearby gene

LINC01160(No orient, 738)

Nearest cancer gene

RAP1A(TSG, No orient, 0)

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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