VISDB - VIS Curation

Basic Information

VIS ID

TVIS30013951

Fusion name

HIV-KIAA0355 integration

State

Validated

Fusion type

Deatction Method

invPCR+RT-PCR

Curated Way

download(RID)

Sample

T cell

Disease

HIV-infected disease

Quality evaluation

Normal

Reported year

2004

Pubmed ID

15163705

Virus Sequence

Virus name

Subtype

Reference genome

Not givenEdit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Fragile sites / regions

FRA19A

Target gene

KIAA0355

Nearby gene

PLEKHF1(No orient, 4921)

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

Junction sequence preview

AAGCTGCAGT

* Color: Human Sequence / Virus Sequence / Overlapped sequence / Unknown sequence

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