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Curation
Gene
Target gene
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Oncogene
Tumor suppressor gene
Nearby gene
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Oncogene
Tumor suppressor gene
MicroRNA
RNA-interaction
ncRNA
Host2Host
Host2Virus
Virus2Host
• miRNA
Host2Host
Host2Virus
Virus2Host
• lncRNA
Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS43000038
Basic Information
VIS ID
TVIS43000038
Fusion name
MCV-PTPRG integration
State
Validated
Fusion type
Deatction Method
RACE
Curated Way
Curated
Sample
Tumor
Disease
Merkel cell carcinoma
Quality evaluation
Normal
Reported year
2008
Pubmed ID
18202256
Virus Sequence
Virus name
Subtype
Reference genome
EU375803
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
CTTGCCAAAAGTGTGAAAACAGATCTCGCCTCAAACCTCACAAGGCTCATGAGGCTCATCATTCTAATGCTAAGCTATTTTATGAATCTAAATCTCAGAA| |AACCATTTGCCAACAAGCCGCAGACACTGTTCTAGCCAAAAGGAGGTTAGAGATGCTGGAAATGACCAGGACAGAAATGCTATGTAAGAAGTTTAAGAAG
Host Sequence
Chromosome
Cytoband
Reference genome
Not given
Edit
Start
End
Orient
Location type
Target gene
PTPRG
Target sequence
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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