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Curation
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Oncogene
Tumor suppressor gene
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Oncogene
Tumor suppressor gene
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ncRNA
Host2Host
Host2Virus
Virus2Host
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Host2Host
Host2Virus
Virus2Host
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Host2Host
Host2Virus
Virus2Host
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VISDB
Viral Integration Site DataBase
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My curation
TVIS43000039
Basic Information
VIS ID
TVIS43000039
Fusion name
MCV-OFCC1 integration
State
Validated
Fusion type
Deatction Method
RACE
Curated Way
Curated
Sample
Tumor
Disease
Merkel cell carcinoma
Quality evaluation
Normal
Reported year
2013
Pubmed ID
23085629
Virus Sequence
Virus name
Subtype
Reference genome
EU375803
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Strand
Gene
Region type
Start
End
Orient
Integrated Sequence
TTATTGTTTATAACTTTATCAAAGCATAGAGTATTTGCTATTAAGAATTTTTGCTCTACCTTCTGCACTATAAGCTTTTTAATTTGTAAAGGAGTGAATA| |AGATGCCTGAAATGTATAATAATTTATGCAAGCCCCCTTACAAATTACTGCAAGAGAATAAGCCACTGCTCAATTATGAATTTCAAGAAAAAGAAAAAGA
Host Sequence
Chromosome
Cytoband
Reference genome
GRCh37.p5
Edit
Start
End
Orient
Location type
Target gene
OFCC1
Target sequence
AAAGCACAGCAGGCAGCTGGGTCAATACAATTGATCTCATCGTTTAACATTTTGCATCAGAGAAAAAGTCAGTGGCAAGAGCCTCACCTTCCAGCGGGG
Junction sequence
iHostLeftEnd
iHostRightBegin
iVirusLeft
iVirusRight
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