VISDB - VIS Curation

Basic Information

VIS ID

TVIS44019420

Fusion name

HTLV-1-PTPN13 integration

State

Not Validated

Fusion type

Deatction Method

HTS

Curated Way

download(RID)

Sample

Nontumor

Disease

HTLV-1 associated myelopathy/tropical spastic paraparesis

Quality evaluation

Normal

Reported year

2017

Pubmed ID

Virus Sequence

Virus name

Subtype

Reference genome

Not givenEdit

Strand

Gene

Region type

Start

End

Orient

Integrated Sequence

Host Sequence

Chromosome

Cytoband

Reference genome

GRCh37/hg19 Edit

Start

End

Orient

Location type

Target gene

Nearest cancer gene

PTPN13(TSG, No orient, 0)

Target sequence

Junction sequence

iHostLeftEnd

iHostRightBegin

iVirusLeft

iVirusRight

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