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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20003799 Human Papillomavirus HPV16 NC_001526.2
 332 421 hg19 chr13 108528009 108528009 q33.3 ENSG00000298702 Tumor Not given PCR and Sanger sequencing 25581428 2015 VISDB1.0
TVIS20004231 Human Papillomavirus HPV16 AY686584
 447 - hg19 chr13 73045910 73045910 q22.1 - Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004232 Human Papillomavirus HPV16 AY686584
 2363 - hg19 chr13 73045758 73045758 q22.1 - Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004316 Human Papillomavirus HPV16 AY686584
 2094 - hg19 chr13 73297079 73297079 q22.1 - Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005045 Human Papillomavirus HPV33 Not given 4043 - hg19 chr13 42932746 42932746 q14.11 ENSG00000298154, EPSTI1 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005046 Human Papillomavirus HPV33 Not given 3623 - hg19 chr13 42930464 42930464 q14.11 ENSG00000298154, EPSTI1 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005047 Human Papillomavirus HPV33 Not given 2460 - hg19 chr13 43104949 43104949 q14.11 DNAJC15 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS30000990 Human Immunodeficiency Virus - Not given - - hg19 chr13 113616305 113616305 q34 TFDP1 PBMC HIV infection/AIDS QiaQuick PCR and Sequencing 25011556 2014 VISDB1.0
TVIS30001014 Human Immunodeficiency Virus - Not given - - hg19 chr13 114252970 114252970 q34 CDC16, ENSG00000289904 PBMC HIV infection/AIDS QiaQuick PCR and Sequencing 25011556 2014 VISDB1.0
TVIS30001216 Human Immunodeficiency Virus - Not given - - hg19 chr13 50953863 50953863 q14.3 RNASEH2B PBMC HIV infection/AIDS QiaQuick PCR and Sequencing 25011556 2014 VISDB1.0
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