Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20005105 Human Papillomavirus HPV52 HQ537731.1
 - - hg19 14 68519324 68562539 q24.1 ENSG00000306173, RAD51B Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005126 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 14 99153744 99311224 q32.2 ENSG00000229402, ENSG00000235785, ENSG00000296828, ENSG00000308312, ENSG00000289137, BCL11B Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20004554 Human Papillomavirus HPV16 NC_001526.2
 450 474 hg19 14 47515165 47515194 q21.3 MDGA2 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004585 Human Papillomavirus HPV16 NC_001526.2
 7219 7256 hg19 14 24818974 24819002 q12 ENSG00000288100, STXBP6 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS10019943 Hepatitis B virus - NC_003977.1
 - - hg19 14 32832878 32833174 q13.1 ENSG00000302430, AKAP6 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019959 Hepatitis B virus - NC_003977.1
 - - hg19 14 22960656 22960822 q11.2 ENSG00000259132 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019982 Hepatitis B virus - NC_003977.1
 - - hg19 14 69779182 69779360 q24.2 SLC10A1 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019983 Hepatitis B virus - NC_003977.1
 - - hg19 14 69786097 69786290 q24.2 SLC10A1 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS30002189 Human Immunodeficiency Virus - Not given - - hg19 14 19711944 19711944 q11.2 - Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30002190 Human Immunodeficiency Virus - Not given - - hg19 14 19930688 19930688 q11.2 - Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0