Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9441 | TVIS44015478 | Human T-lymphotropic Virus | - | Not given | - | - | hg19 | chr16 | 62236458 | 62236458 | q21 | - | Nontumor | Adult T-cell leukemia | High throughput sequenicng | 24735963 | 2014 | VISDB1.0 |
| 9442 | TVIS10014886 | Hepatitis B virus | - |
NC_003977.1 |
1835 | 2021 | GRCh37.p10 | chr16 | 30396888 | 30397035 | p11.2 | ZNF48 | Cell line | Hepatocellular carcinoma | PCR and Sanger sequencing | 24582836 | 2014 | VISDB1.0 |
| 9443 | TVIS20005074 | Human Papillomavirus | HPV16 |
HQ644271.1 |
- | - | hg19 | chr16 | 14619598 | 14678790 | p13.12 | ENSG00000305482, RNU7-125P, BFAR, PARN, PLA2G10 | Tumor | Squamous-cell carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 9444 | TVIS10019941 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr16 | 70162357 | 70162513 | q22.1 | ENSG00000247228, PDPR | Nontumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 9445 | TVIS10019949 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr16 | 31402113 | 31402257 | p11.2 | ENSG00000308290, ITGAD | Tumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 9446 | TVIS10019950 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr16 | 31407533 | 31407670 | p11.2 | ITGAD | Tumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 9447 | TVIS10019951 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr16 | 31403499 | 31403643 | p11.2 | ENSG00000260757, ENSG00000308290, ITGAD | Tumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 9448 | TVIS10019953 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr16 | 31390920 | 31391187 | p11.2 | ENSG00000308290 | Tumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 9449 | TVIS30002390 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr16 | 316517 | 316517 | p13.3 | AXIN1 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 9450 | TVIS30002391 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr16 | 316584 | 316584 | p13.3 | AXIN1 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
