Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5911 | TVIS44015411 | Human T-lymphotropic Virus | - | Not given | - | - | hg19 | chr18 | 58664482 | 58664482 | q21.32 | LINC03110 | Nontumor | Adult T-cell leukemia | High throughput sequenicng | 24735963 | 2014 | VISDB1.0 |
| 5912 | TVIS44015448 | Human T-lymphotropic Virus | - | Not given | - | - | hg19 | chr18 | 31827987 | 31827987 | q12.1 | ENSG00000300995 | Nontumor | Adult T-cell leukemia | High throughput sequenicng | 24735963 | 2014 | VISDB1.0 |
| 5913 | TVIS20004401 | Human Papillomavirus | HPV16 |
NC_001526.1 |
2313 | - | GRCh37.p5 | chr18 | 35496295 | 35496295 | q12.2 | ENSG00000267140, INO80C | Tumor | Oropharyngeal squamous cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 24586376 | 2014 | VISDB1.0 |
| 5914 | TVIS20004421 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr18 | 35499051 | 35499051 | q12.2 | - | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 5915 | TVIS20004433 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr18 | 63173254 | 63173254 | q21.3 | BCL2 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 5916 | TVIS20005095 | Human Papillomavirus | HPV56 | Not given | - | - | hg19 | chr18 | 63635032 | 63683800 | q21.33 | SERPINB4, SERPINB3, SERPINB11 | Tumor | Squamous-cell carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 5917 | TVIS10019963 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr18 | 68302988 | 68303143 | q22.1 | ENSG00000287907 | Nontumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 5918 | TVIS30002872 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr18 | 198591 | 198591 | p11.32 | USP14 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 5919 | TVIS30002873 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr18 | 2576659 | 2576659 | p11.32 | NDC80 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 5920 | TVIS30002874 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr18 | 2599332 | 2599332 | p11.32 | NDC80 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
