Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8731 | TVIS20004584 | Human Papillomavirus | HPV16 |
NC_001526.2 |
6876 | 6902 | hg19 | chr19 | 55307401 | 55307456 | q13.42 | BRSK1 | Cell line | Cervical cancer | FISH, WGS, RNA-seq, qPCR | 24201445 | distinct from chromothripsis and other mutational processes | VISDB1.0 |
| 8732 | TVIS10019947 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr19 | 35723004 | 35723503 | q13.12 | KMT2B | Tumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 8733 | TVIS10019955 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr19 | 35722859 | 35723271 | q13.12 | KMT2B | Tumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 8734 | TVIS10019956 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr19 | 35721399 | 35721827 | q13.12 | KMT2B | Tumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 8735 | TVIS10019964 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr19 | 51595333 | 51595501 | q13.41 | ENSG00000293175 | Nontumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 8736 | TVIS10019984 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr19 | 6671009 | 6671359 | p13.3 | - | Nontumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 8737 | TVIS10019985 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr19 | 53327395 | 53327628 | q13.42 | - | Nontumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 8738 | TVIS30002911 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr19 | 509821 | 509821 | p13.3 | TPGS1, MADCAM1-AS1 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 8739 | TVIS30002912 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr19 | 904649 | 904649 | p13.3 | R3HDM4 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 8740 | TVIS30002913 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr19 | 1029876 | 1029876 | p13.3 | CNN2 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
