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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20005115 Human Papillomavirus HPV18 Not given - - hg19 chr2 145642527 145727483 q22.3 ENSG00000304069, ENSG00000286225 Tumor Adenocarcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005117 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 chr2 145720866 145817154 q22.3 ENSG00000298866, ENSG00000302160, ENSG00000286225 Tumor Adenocarcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005119 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 chr2 66334908 66355143 p14 ENSG00000225815 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20004560 Human Papillomavirus HPV16 NC_001526.2
 1364 1392 hg19 chr2 27136130 27136178 p23.3 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004564 Human Papillomavirus HPV16 NC_001526.2
 2030 2057 hg19 chr2 22479181 22479210 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004576 Human Papillomavirus HPV16 NC_001526.2
 4940 4962 hg19 chr2 27095245 27095272 p23.3 KHK Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004577 Human Papillomavirus HPV16 NC_001526.2
 5380 5404 hg19 chr2 22422746 22422774 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004582 Human Papillomavirus HPV16 NC_001526.2
 5957 5987 hg19 chr2 22439141 22439163 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004583 Human Papillomavirus HPV16 NC_001526.2
 6801 6827 hg19 chr2 22416193 22416220 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004586 Human Papillomavirus HPV16 NC_001526.2
 7259 7359 hg19 chr2 22416230 22416260 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
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