Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004429 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 22 44950929 44950929 q13.31 PHF21B Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20005067 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 2 120847010 120999975 q14.2 ENSG00000271709, ENSG00000295936, ENSG00000295094, GLI2 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005077 Human Papillomavirus HPV31 Not given - - hg19 22 46109303 46125439 q13.31 MIRLET7A3, MIR4763, MIRLET7B, MIRLET7BHG Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005083 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 20 42970571 43030034 q12 PTPRT-AS1, ENSG00000299658, PTPRT Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005098 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 2 156323101 156347359 q24.1 NR4A2, ENSG00000309294 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005103 Human Papillomavirus HPV31 Not given - - hg19 2 145569722 145585164 q22.3 ENSG00000225107, ENSG00000286225 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005108 Human Papillomavirus HPV33 Not given - - hg19 22 17633057 17633623 q11.21 BCL2L13 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005110 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 2 145675716 145697786 q22.3 ENSG00000304069, ENSG00000286225 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005111 Human Papillomavirus HPV18 Not given - - hg19 20 15044939 15087181 p12.1 MACROD2 Tumor Adenosquamous carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005112 Human Papillomavirus HPV18 Not given - - hg19 20 14974269 14974655 p12.1 MACROD2 Tumor Adenosquamous carcinoma Whole-genome sequencing 24390348 2014 VISDB1.0