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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS30019626 Human Immunodeficiency Virus - HXB2
 - - hg38 chr20 45397178 45397178 q13.12 SYS1-DBNDD2, TP53TG5 Patient - Integration Site Loop Amplification (ISLA) and next-generation sequencing 35026153 2024 Curated
TVIS30019693 Human Immunodeficiency Virus - HXB2
 - - hg38 chr20 33836561 33836561 q11.22 CHMP4B Patient - Integration Site Loop Amplification (ISLA) and next-generation sequencing 35026153 2024 Curated
TVIS20019603 Human Papillomavirus HPV16 NC_001526.2
 3053 3054 hg19 chr20 50941815 50941816 q13.13 ADNP-AS1, DPM1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019623 Human Papillomavirus HPV16 NC_001526.2
 3334 3335 hg19 chr20 14899584 14899585 p12.1 MACROD2-AS1, MACROD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019624 Human Papillomavirus HPV16 NC_001526.2
 2358 2359 hg19 chr20 15288483 15288484 p12.1 MACROD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019904 Human Papillomavirus HPV16 NC_001526.2
 3401 3402 hg19 chr20 1864340 1864341 p13 ENSG00000286288 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019905 Human Papillomavirus HPV16 NC_001526.2
 3022 3023 hg19 chr20 1866205 1866206 p13 ENSG00000286288 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020107 Human Papillomavirus HPV16 NC_001526.2
 2637 2638 hg19 chr20 63251865 63251866 q13.33 NKAIN4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020293 Human Papillomavirus HPV16 NC_001526.2
 3376 3377 hg19 chr20 47894938 47894951 q13.13 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020301 Human Papillomavirus HPV33 HQ537707.1
 2045 2046 hg19 chr20 33997778 33997779 q11.22 RALY Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
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