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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20005281 Human Papillomavirus HPV16 AF536179.1
 - - hg19 chr20 31726244 31726245 q11.21 - Tumor Bladder cancer/Urothelial carcinoma Bioinformatic analysis of Whole genome and RNA sequencing data using VIcaller pipeline; PCR and Sanger sequencing validation 30872350 2019 ViMIC
TVIS20010622 Human Papillomavirus HPV18 - 5308 - hg19 chr20 40839020 40839021 q12 ENSG00000229771 Tumor Prostate cancer Probe-capture and next-generation sequencing 30794288 2019 ViMIC
TVIS20010624 Human Papillomavirus HPV18 - 2245 - hg19 chr20 47398143 47398144 q13.12 LINC01754 Tumor Prostate cancer Probe-capture and next-generation sequencing 30794288 2019 ViMIC
TVIS20010733 Human Papillomavirus - - - - hg38 chr20 52677001 52677002 q13.2 LINC01524 Tumor Cervical cancer Double-capture preparation and sequencing 30728408 2019 ViMIC
TVIS20010747 Human Papillomavirus - - - - hg38 chr20 5751892 5751893 p12.3 SHLD1 ASCHL Cervical cancer Double-capture preparation and sequencing 30728408 2019 ViMIC
TVIS20007924 Human Papillomavirus HPV18 - 3651 - hg19 chr20 50238236 50238237 q13.13 ENSG00000310479, PELATON Tumor Squamous cell carcinoma HPV probe capture sequencing 30567904 2019 ViMIC
TVIS20007925 Human Papillomavirus HPV18 - 3132 - hg19 chr20 50262648 50262649 q13.13 PELATON Tumor Squamous cell carcinoma HPV probe capture sequencing 30567904 2019 ViMIC
TVIS20007935 Human Papillomavirus HPV16 - 956 - hg19 chr20 53465932 53465933 q13.2 TSHZ2, ENSG00000271774, ENSG00000259723 Tumor Squamous cell carcinoma HPV probe capture sequencing 30567904 2019 ViMIC
TVIS20007948 Human Papillomavirus HPV16 - 7226 - hg19 chr20 4807424 4807425 p13 RASSF2 Tumor Squamous cell carcinoma HPV probe capture sequencing 30567904 2019 ViMIC
TVIS20008091 Human Papillomavirus HPV16 - 3899 - hg19 chr20 53368604 53368605 q13.2 TSHZ2, ENSG00000271774 Tumor Squamous cell carcinoma HPV probe capture sequencing 30567904 2019 ViMIC
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