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VISDB ID Virus name Virus subtype Virus genome Breakpoint 1 Breakpoint 2 Human genome Chromosome hg38 start hg38 end Loci Target gene Sample Type Disease Method PubMed ID Year Curated way ▼
TVIS30019191 Human Immunodeficiency Virus - HXB2
 - - hg38 21 25470531 25470531 q21.2 ENSG00000229962 Patient - Integration Site Loop Amplification (ISLA) and next-generation sequencing 35026153 2024 Curated
TVIS30019251 Human Immunodeficiency Virus - HXB2
 - - hg38 21 12191432 12191432 q11.1 - Patient - Integration Site Loop Amplification (ISLA) and next-generation sequencing 35026153 2024 Curated
TVIS30019504 Human Immunodeficiency Virus - HXB2
 - - hg38 21 33340912 33340912 q22.11 IFNAR1 Patient - Integration Site Loop Amplification (ISLA) and next-generation sequencing 35026153 2024 Curated
TVIS30019524 Human Immunodeficiency Virus - HXB2
 - - hg38 21 34080096 34080096 q22.11 MRPS6, ENSG00000293606, SLC5A3 Patient - Integration Site Loop Amplification (ISLA) and next-generation sequencing 35026153 2024 Curated
TVIS30019558 Human Immunodeficiency Virus - HXB2
 - - hg38 21 15834929 15834929 q21.1 USP25 Patient - Integration Site Loop Amplification (ISLA) and next-generation sequencing 35026153 2024 Curated
TVIS20019509 Human Papillomavirus HPV16 NC_001526.2
 6940 6941 hg19 21 10390066 10390067 p11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019894 Human Papillomavirus HPV16 NC_001526.2
 252 253 hg19 21 8573937 8573938 p11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020169 Human Papillomavirus HPV16 NC_001526.2
 4419 4420 hg19 21 41639174 41639175 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020170 Human Papillomavirus HPV16 NC_001526.2
 856 857 hg19 21 41643183 41643184 q22.3 ENSG00000296085 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020171 Human Papillomavirus HPV16 NC_001526.2
 877 878 hg19 21 41645438 41645439 q22.3 ENSG00000296085 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated