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VISDB ID Virus name Virus subtype Virus genome Breakpoint 1 Breakpoint 2 Human genome Chromosome hg38 start hg38 end Loci Target gene Sample Type Disease Method PubMed ID Year Curated way ▼
TVIS20020172 Human Papillomavirus HPV16 NC_001526.2
 2217 2218 hg19 21 41647721 41647722 q22.3 ENSG00000296085 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020173 Human Papillomavirus HPV16 NC_001526.2
 1307 1308 hg19 21 41664635 41664636 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020174 Human Papillomavirus HPV16 NC_001526.2
 4969 4970 hg19 21 41666399 41666400 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020175 Human Papillomavirus HPV16 NC_001526.2
 3402 3403 hg19 21 41667372 41667373 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020176 Human Papillomavirus HPV16 NC_001526.2
 1087 1088 hg19 21 41673074 41673075 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020177 Human Papillomavirus HPV16 NC_001526.2
 1224 1225 hg19 21 41674180 41674181 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020178 Human Papillomavirus HPV16 NC_001526.2
 2028 2029 hg19 21 41676165 41676166 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020179 Human Papillomavirus HPV16 NC_001526.2
 2128 2129 hg19 21 41676443 41676444 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020180 Human Papillomavirus HPV16 NC_001526.2
 1735 1736 hg19 21 41677858 41677859 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020181 Human Papillomavirus HPV16 NC_001526.2
 3421 3422 hg19 21 41677910 41677911 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated