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VISDB ID Virus name Virus subtype Virus genome Breakpoint 1 Breakpoint 2 Human genome Chromosome hg38 start hg38 end Loci Target gene Sample Type Disease Method PubMed ID Year Curated way ▼
TVIS20020182 Human Papillomavirus HPV16 NC_001526.2
 2950 2951 hg19 21 41693786 41693787 q22.3 LINC00111 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020183 Human Papillomavirus HPV16 NC_001526.2
 1253 1254 hg19 21 41694041 41694042 q22.3 LINC00111 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020184 Human Papillomavirus HPV16 NC_001526.2
 679 680 hg19 21 41694045 41694046 q22.3 LINC00111 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020185 Human Papillomavirus HPV16 NC_001526.2
 3019 3020 hg19 21 41694077 41694078 q22.3 LINC00111 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020186 Human Papillomavirus HPV16 NC_001526.2
 4844 4845 hg19 21 41694636 41694637 q22.3 LINC00111 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020187 Human Papillomavirus HPV16 NC_001526.2
 5111 5112 hg19 21 41694705 41694706 q22.3 LINC00111 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020212 Human Papillomavirus HPV16 NC_001526.2
 4478 4479 hg19 21 16486276 16486277 q21.1 MIR99AHG Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020249 Human Papillomavirus HPV16 NC_001526.2
 5630 5631 hg19 21 38814964 38814965 q22.2 ETS2, ETS2-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020250 Human Papillomavirus HPV16 NC_001526.2
 2619 2620 hg19 21 38818701 38818702 q22.2 ETS2, ETS2-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020251 Human Papillomavirus HPV16 NC_001526.2
 1009 1010 hg19 21 38837581 38837582 q22.2 ETS2-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated