Search Results


VISDB ID Virus name Virus subtype Virus genome Breakpoint 1 Breakpoint 2 Human genome Chromosome hg38 start hg38 end Loci Target gene Sample Type Disease Method PubMed ID Year Curated way ▼
TVIS20018946 Human Papillomavirus HpV16 AF534061
 3842 - hg19 21 45753719 45753719 q22.3 PCBP3 Tumor-derived tumor samples and cell lines Penile Squamous Cell Carcinoma High-throughput Viral Integration Detection method 34885212 2021 Curated
TVIS20019500 Human Papillomavirus HpV33 M12732
 3971 - hg19 21 44902661 44902661 q22.3 ITGB2 Tumor-derived tumor samples and cell lines Penile Squamous Cell Carcinoma High-throughput Viral Integration Detection method 34885212 2021 Curated
TVIS20016802 Human Papillomavirus HPV16 HPV16REF
 5776 - hg19 21 19811707 19811707 q21.1 - Tumor derived xenograft Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS30017963 Human Immunodeficiency Virus - - - - hg19 21 9033172 9033172 p11.2 ENSG00000293623, TEKT4P2 Tumor - Linker-mediated PCR (LM-PCR) and high-throughput sequencing 33844021 2022 Curated
TVIS30018054 Human Immunodeficiency Virus - - - - hg19 21 14505071 14505071 q11.2 SAMSN1 Tumor - Linker-mediated PCR (LM-PCR) and high-throughput sequencing 33844021 2022 Curated
TVIS30018100 Human Immunodeficiency Virus - - - - hg19 21 41352609 41352609 q22.3 FAM3B Tumor - Linker-mediated PCR (LM-PCR) and high-throughput sequencing 33844021 2022 Curated
TVIS30018106 Human Immunodeficiency Virus - - - - hg19 21 25671710 25671710 q21.3 JAM2 Tumor - Linker-mediated PCR (LM-PCR) and high-throughput sequencing 33844021 2022 Curated
TVIS30018188 Human Immunodeficiency Virus - - - - hg19 21 25465563 25465563 q21.2 ENSG00000229962 Tumor - Linker-mediated PCR (LM-PCR) and high-throughput sequencing 33844021 2022 Curated
TVIS30018346 Human Immunodeficiency Virus - - - - hg19 21 26209307 26209307 q21.3 APP-DT Tumor - Linker-mediated PCR (LM-PCR) and high-throughput sequencing 33844021 2022 Curated
TVIS30018446 Human Immunodeficiency Virus - - - - hg19 21 26434558 26434558 q21.3 ENSG00000294485, CYYR1-AS1 Tumor - Linker-mediated PCR (LM-PCR) and high-throughput sequencing 33844021 2022 Curated