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VISDB ID Virus name Virus subtype Virus genome Breakpoint 1 Breakpoint 2 Human genome Chromosome hg38 start hg38 end Loci Target gene Sample Type Disease Method PubMed ID Year Curated way ▼
TVIS20006398 Human Papillomavirus HPV16 NC_001526.2
 4878 - hg19 21 43958246 43958247 q22.3 ENSG00000288593, AGPAT3 Tumor Squamous cell carcinoma Targeted Capture and Illumina Sequencing 32714374 2020 ViMIC
TVIS20006564 Human Papillomavirus HPV16 NC_001526.2
 5882 - hg19 21 37509438 37509439 q22.13 DYRK1A Tumor Squamous cell carcinoma Targeted Capture and Illumina Sequencing 32714374 2020 ViMIC
TVIS20006571 Human Papillomavirus HPV16 NC_001526.2
 5940 - hg19 21 35798668 35798669 q22.12 RUNX1 Tumor Squamous cell carcinoma Targeted Capture and Illumina Sequencing 32714374 2020 ViMIC
TVIS20006601 Human Papillomavirus HPV16 NC_001526.2
 6069 - hg19 21 15461296 15461297 q21.1 ENSG00000229425 Tumor Squamous cell carcinoma Targeted Capture and Illumina Sequencing 32714374 2020 ViMIC
TVIS20006672 Human Papillomavirus HPV16 NC_001526.2
 655 - hg19 21 19124683 19124684 q21.1 - Tumor Squamous cell carcinoma Targeted Capture and Illumina Sequencing 32714374 2020 ViMIC
TVIS20006770 Human Papillomavirus HPV16 NC_001526.2
 7110 - hg19 21 37351659 37351660 q22.13 ENSG00000287637 Tumor Squamous cell carcinoma Targeted Capture and Illumina Sequencing 32714374 2020 ViMIC
TVIS20006844 Human Papillomavirus HPV16 NC_001526.2
 7405 - hg19 21 35766671 35766672 q22.12 RUNX1 Tumor Squamous cell carcinoma Targeted Capture and Illumina Sequencing 32714374 2020 ViMIC
TVIS20006985 Human Papillomavirus HPV16 NC_001526.2
 988 - hg19 21 31209469 31209470 q22.11 TIAM1 Tumor Squamous cell carcinoma Targeted Capture and Illumina Sequencing 32714374 2020 ViMIC
TVIS20007152 Human Papillomavirus HPV16 NC_001526.2
 4287 - hg19 21 21277381 21277382 q21.1 NCAM2 Tumor Squamous cell carcinoma Nanopore squencing 32714374 2020 ViMIC
TVIS20007164 Human Papillomavirus HPV16 NC_001526.2
 0 - hg19 21 29839047 29839048 q21.3 GRIK1 Tumor Squamous cell carcinoma Nanopore squencing 32714374 2020 ViMIC