Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3951 | TVIS44015453 | Human T-lymphotropic Virus | - | Not given | - | - | hg19 | chr21 | 15551801 | 15551801 | q21.1 | ENSG00000307760, ENSG00000229425 | Nontumor | Adult T-cell leukemia | High throughput sequenicng | 24735963 | 2014 | VISDB1.0 |
| 3952 | TVIS44015483 | Human T-lymphotropic Virus | - | Not given | - | - | hg19 | chr21 | 28229147 | 28229147 | q21.3 | - | Nontumor | Adult T-cell leukemia | High throughput sequenicng | 24735963 | 2014 | VISDB1.0 |
| 3953 | TVIS20004559 | Human Papillomavirus | HPV16 |
NC_001526.2 |
1242 | 1272 | hg19 | chr21 | 20582438 | 20582475 | q21.1 | - | Cell line | Cervical cancer | FISH, WGS, RNA-seq, qPCR | 24201445 | distinct from chromothripsis and other mutational processes | VISDB1.0 |
| 3954 | TVIS10019944 | Hepatitis B virus | - |
NC_003977.1 |
- | - | hg19 | chr21 | 28353277 | 28353385 | q21.3 | ENSG00000307297, ENSG00000232855 | Nontumor | Hepatocellular carcinoma | de novo assembly of RNA-seq reads | 24085110 | 2013 | VISDB1.0 |
| 3955 | TVIS30003344 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr21 | 14443989 | 14443989 | q11.2 | - | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 3956 | TVIS30003345 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr21 | 14548005 | 14548005 | q11.2 | SAMSN1 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 3957 | TVIS30003346 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr21 | 14548697 | 14548697 | q11.2 | SAMSN1 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 3958 | TVIS30003347 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr21 | 25284792 | 25284792 | q21.2 | ENSG00000222042 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 3959 | TVIS30003348 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr21 | 31149224 | 31149224 | q22.11 | TIAM1 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
| 3960 | TVIS30003349 | Human Immunodeficiency Virus | - | Not given | - | - | hg19 | chr21 | 32670842 | 32670842 | q22.11 | SYNJ1 | Cell line | HIV infection/AIDS | QiaQuick PCR and Sequencing | 23953889 | 2013 | VISDB1.0 |
