Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS44051754 Human T-lymphotropic Virus - - - - hg38 22 46785228 46785228 q13.31 TBC1D22A HTLV-1 infected cell line - High throughput sequenicng 35654946 2022 Curated
TVIS44051755 Human T-lymphotropic Virus - - - - hg38 22 46785229 46785229 q13.31 TBC1D22A HTLV-1 infected cell line - High throughput sequenicng 35654946 2022 Curated
TVIS44051756 Human T-lymphotropic Virus - - - - hg38 22 50189398 50189398 q13.33 TRABD HTLV-1 infected cell line - High throughput sequenicng 35654946 2022 Curated
TVIS44051757 Human T-lymphotropic Virus - - - - hg38 22 50520946 50520946 q13.33 NCAPH2 HTLV-1 infected cell line - High throughput sequenicng 35654946 2022 Curated
TVIS44051758 Human T-lymphotropic Virus - - - - hg38 22 50542899 50542899 q13.33 ENSG00000273272, KLHDC7B-DT HTLV-1 infected cell line - High throughput sequenicng 35654946 2022 Curated
TVIS44051759 Human T-lymphotropic Virus - - - - hg38 22 50569870 50569870 q13.33 CPT1B, CHKB-CPT1B HTLV-1 infected cell line - High throughput sequenicng 35654946 2022 Curated
TVIS20020649 Human Papillomavirus HPV16 NC_028125
 - - hg19 22 21606868 21961157 q11.21,q11.22 YDJC, ENSG00000301561, CCDC116, ENSG00000273342, ENSG00000295055, MIR301B, MIR130B, ENSG00000284651, ENSG00000284654, ENSG00000295080, ENSG00000284621, ENSG00000286365, RN7SL280P, ENSG00000299757, RNA5SP493, MPPE1P2, UBE2L3, SDF2L1, ENSG00000207751, ENSG00000284630, PPIL2, YPEL1, ENSG00000286127, MAPK1, ENSG00000289564, ENSG00000294146, PPM1F, PPM1F-AS1, ENSG00000309998, TOP3B Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020650 Human Papillomavirus HPV16 NC_028125
 - - hg19 22 21606878 21961167 q11.21,q11.22 YDJC, ENSG00000301561, CCDC116, ENSG00000273342, ENSG00000295055, MIR301B, MIR130B, ENSG00000284651, ENSG00000284654, ENSG00000295080, ENSG00000284621, ENSG00000286365, RN7SL280P, ENSG00000299757, RNA5SP493, MPPE1P2, UBE2L3, SDF2L1, ENSG00000207751, ENSG00000284630, PPIL2, YPEL1, ENSG00000286127, MAPK1, ENSG00000289564, ENSG00000294146, PPM1F, PPM1F-AS1, ENSG00000309998, TOP3B Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020657 Human Papillomavirus HPV16 NC_028125
 - - hg19 22 33251523 33647509 q12.3 ENSG00000230741, ENSG00000302643, MIR4764, LARGE1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020658 Human Papillomavirus HPV16 NC_028125
 - - hg19 22 35290578 35686571 q12.3 ENSG00000273176, MIR3909, MIR6069, ENSG00000282602, ENSG00000282041, TRMT112P8, ENSG00000273044, ENSG00000304386, ENSG00000288777, ENSG00000268818, ENSG00000228587, TOM1, MCM5, RASD2, ENSG00000304364, MB, HMGXB4, HMOX1, APOL6 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated