Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020075 Human Papillomavirus HPV16 NC_001526.2
 2312 2313 hg19 22 38171883 38171884 q13.1 PLA2G6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020366 Human Papillomavirus HPV16 NC_001526.2
 6360 6361 hg19 22 19754720 19754721 q11.21 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020367 Human Papillomavirus HPV16 NC_001526.2
 1642 1643 hg19 22 19758700 19758701 q11.21 TBX1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020368 Human Papillomavirus HPV16 NC_001526.2
 6998 6999 hg19 22 19803515 19803516 q11.21 GNB1L Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020369 Human Papillomavirus HPV16 NC_001526.2
 6338 6339 hg19 22 19829885 19829886 q11.21 GNB1L Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20017292 Human Papillomavirus HpV16 AF125673
 7563 - hg19 22 37154549 37154549 q12.3 IL2RB Tumor-derived tumor samples and cell lines Penile Squamous Cell Carcinoma High-throughput Viral Integration Detection method 34885212 2021 Curated
TVIS20017888 Human Papillomavirus HpV16 AF534061
 4588 - hg19 22 29860624 29860624 q12.2 - Tumor-derived tumor samples and cell lines Penile Squamous Cell Carcinoma High-throughput Viral Integration Detection method 34885212 2021 Curated
TVIS20017889 Human Papillomavirus HpV16 AF534061
 932 - hg19 22 33342009 33342009 q12.3 LARGE1 Tumor-derived tumor samples and cell lines Penile Squamous Cell Carcinoma High-throughput Viral Integration Detection method 34885212 2021 Curated
TVIS20017890 Human Papillomavirus HpV16 AF534061
 2114 - hg19 22 36696229 36696229 q12.3 CACNG2 Tumor-derived tumor samples and cell lines Penile Squamous Cell Carcinoma High-throughput Viral Integration Detection method 34885212 2021 Curated
TVIS20017891 Human Papillomavirus HpV16 AF534061
 1390 - hg19 22 37738232 37738232 q13.1 TRIOBP Tumor-derived tumor samples and cell lines Penile Squamous Cell Carcinoma High-throughput Viral Integration Detection method 34885212 2021 Curated