TVIS20018954
|
Human Papillomavirus |
HpV16 |
AF534061 |
4398 |
- |
hg19 |
22 |
41496698 |
41496698 |
q13.2 |
ACO2 |
Tumor-derived tumor samples and cell lines |
Penile Squamous Cell Carcinoma |
High-throughput Viral Integration Detection method |
34885212 |
2021 |
Curated |
TVIS20018955
|
Human Papillomavirus |
HpV16 |
AF125673 |
3923 |
- |
hg19 |
22 |
42054130 |
42054130 |
q13.2 |
WBP2NL |
Tumor-derived tumor samples and cell lines |
Penile Squamous Cell Carcinoma |
High-throughput Viral Integration Detection method |
34885212 |
2021 |
Curated |
TVIS20018956
|
Human Papillomavirus |
HpV16 |
AF534061 |
1306 |
- |
hg19 |
22 |
42887533 |
42887533 |
q13.2 |
PACSIN2 |
Tumor-derived tumor samples and cell lines |
Penile Squamous Cell Carcinoma |
High-throughput Viral Integration Detection method |
34885212 |
2021 |
Curated |
TVIS20018957
|
Human Papillomavirus |
HpV16 |
AF534061 |
7173 |
- |
hg19 |
22 |
43942397 |
43942397 |
q13.31 |
PNPLA3 |
Tumor-derived tumor samples and cell lines |
Penile Squamous Cell Carcinoma |
High-throughput Viral Integration Detection method |
34885212 |
2021 |
Curated |
TVIS20019484
|
Human Papillomavirus |
HpV58 |
D90400 |
997 |
- |
hg19 |
22 |
17267783 |
17267783 |
q11.1 |
- |
Tumor-derived tumor samples and cell lines |
Penile Squamous Cell Carcinoma |
High-throughput Viral Integration Detection method |
34885212 |
2021 |
Curated |
TVIS30018979
|
Human Immunodeficiency Virus |
- |
- |
- |
- |
hg38 |
22 |
38712522 |
38712522 |
q13.1 |
GTPBP1 |
Tumor |
- |
Matched integration site and proviral sequencing (MIP-seq) protocol |
34636876 |
2021 |
Curated |
TVIS20017083
|
Human Papillomavirus |
HPV16; HPV70 |
NS |
1824 |
- |
hg19 |
22 |
50455894 |
50455894 |
q13.33 |
SBF1 |
Tumor |
Cervical cancer |
HPV-targeted long-read sequencing |
34526665 |
2021 |
Curated |
TVIS20016932
|
Human Papillomavirus |
HPV18 |
HPV18REF |
3485 |
- |
hg38 |
22 |
23095104 |
23095104 |
q11.22 |
GNAZ, RSPH14 |
Tumor |
Cervical cancer |
Tagmentation-assisted multiplex PCR enrichment sequencing (TaME-seq) protocol |
34175494 |
2021 |
Curated |
TVIS20016940
|
Human Papillomavirus |
HPV18 |
HPV18REF |
4914 |
- |
hg38 |
22 |
45580598 |
45580598 |
q13.31 |
FBLN1 |
Tumor |
Cervical cancer |
Tagmentation-assisted multiplex PCR enrichment sequencing (TaME-seq) protocol |
34175494 |
2021 |
Curated |
TVIS30017970
|
Human Immunodeficiency Virus |
- |
- |
- |
- |
hg19 |
22 |
40498881 |
40498881 |
q13.1 |
MRTFA |
Tumor |
- |
Linker-mediated PCR (LM-PCR) and high-throughput sequencing |
33844021 |
2022 |
Curated |