Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS44015454 Human T-lymphotropic Virus - Not given - - hg19 chr22 38070931 38070931 q13.1 PICK1, ENSG00000233739 Nontumor Adult T-cell leukemia High throughput sequenicng 24735963 2014 VISDB1.0
TVIS20004404 Human Papillomavirus HPV16 NC_001526.1
 1767 - GRCh37.p5 chr22 32866733 32866733 q12.3 SYN3 Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004408 Human Papillomavirus HPV16 NC_001526.1
 1334 - GRCh37.p5 chr22 24837056 24837056 q11.23 SGSM1 Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004425 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr22 31906205 31906205 q12.3 DEPDC5, ENSG00000285404 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004429 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr22 44950929 44950929 q13.31 PHF21B Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20005077 Human Papillomavirus HPV31 Not given - - hg19 chr22 46109303 46125439 q13.31 MIRLET7A3, MIR4763, MIRLET7B, MIRLET7BHG Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005108 Human Papillomavirus HPV33 Not given - - hg19 chr22 17633057 17633623 q11.21 BCL2L13 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS10019986 Hepatitis B virus - NC_003977.1
 - - hg19 chr22 40997082 40997235 q13.2 ENSG00000304944 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS30003367 Human Immunodeficiency Virus - Not given - - hg19 chr22 17716111 17716111 q11.21 BCL2L13 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003368 Human Immunodeficiency Virus - Not given - - hg19 chr22 19117686 19117686 q11.21 DGCR2 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0