Search Results


VISDB ID Virus name Virus subtype Virus genome Breakpoint 1 Breakpoint 2 Human genome Chromosome hg38 start hg38 end Loci Target gene Sample Type Disease Method PubMed ID Year Curated way ▼
TVIS46000956 BK polyomavirus Genotype I, IV AB217919.1
 2353 - hg19 22 45628205 45628205 q13.31 LINC01589 Tumor Bladder cancer/Urothelial carcinoma Virome capture next-generation sequencing 37507072 2023 Curated
TVIS20030670 Human Papillomavirus HPV18 - 2703 2704 hg38 22 47227765 47227766 q13.31 - TCGA-CESC HPV+ tumor Bioinformatic analysis using Polyidus pipeline 37365652 2023 Curated
TVIS20030754 Human Papillomavirus HPV39 - 942 943 hg38 22 47144377 47144378 q13.31 TBC1D22A TCGA-CESC HPV+ tumor Bioinformatic analysis using Polyidus pipeline 37365652 2023 Curated
TVIS20030826 Human Papillomavirus HPV16 - 879 880 hg38 22 45842987 45842988 q13.31 ATXN10 TCGA-CESC HPV+ tumor Bioinformatic analysis using Polyidus pipeline 37365652 2023 Curated
TVIS20030883 Human Papillomavirus HPV31 - 3437 3438 hg38 22 22079077 22079078 q11.22 - TCGA-CESC HPV+ tumor Bioinformatic analysis using Polyidus pipeline 37365652 2023 Curated
TVIS42001691 Epstein-Barr Virus - - 40199 40200 hg38 22 18127036 18127037 q11.21 TUBA8, ENSG00000280007, ENSG00000288683 LCL cell lines Head and Neck squamous cell carcinoma Bioinformatic analysis using Polyidus pipeline 37365652 2023 Curated
TVIS20029568 Human Papillomavirus Muliple HPV6: FR751337.1, HPV82: AF293961.1, HPV69: AB027020.1, HPV68: FR751039.1, HPV66: EF177191.1, HPV59: EU918767.1, HPV58: HQ537777.1, HPV56: EF177181.1, HPV52: HQ537751.1, HPV45: EF202167.1, HPV39: M62849.1, HPV35: HQ537730.1, HPV33: HQ537688.1, HPV31: HQ537687.1, HPV18: AY262282.1, HPV16: NC_001526.2, HPV11: HE574705.1
 - - hg38 22 30487572 30487572 q12.2 ENSG00000181123 Tumor Cervial Cancer HPV-capture sequencing 37212325 2023 Curated
TVIS20029569 Human Papillomavirus Muliple HPV6: FR751337.1, HPV82: AF293961.1, HPV69: AB027020.1, HPV68: FR751039.1, HPV66: EF177191.1, HPV59: EU918767.1, HPV58: HQ537777.1, HPV56: EF177181.1, HPV52: HQ537751.1, HPV45: EF202167.1, HPV39: M62849.1, HPV35: HQ537730.1, HPV33: HQ537688.1, HPV31: HQ537687.1, HPV18: AY262282.1, HPV16: NC_001526.2, HPV11: HE574705.1
 - - hg38 22 31480747 31480747 q12.2 DRG1, EIF4ENIF1 Tumor Cervial Cancer HPV-capture sequencing 37212325 2023 Curated
TVIS20029570 Human Papillomavirus Muliple HPV6: FR751337.1, HPV82: AF293961.1, HPV69: AB027020.1, HPV68: FR751039.1, HPV66: EF177191.1, HPV59: EU918767.1, HPV58: HQ537777.1, HPV56: EF177181.1, HPV52: HQ537751.1, HPV45: EF202167.1, HPV39: M62849.1, HPV35: HQ537730.1, HPV33: HQ537688.1, HPV31: HQ537687.1, HPV18: AY262282.1, HPV16: NC_001526.2, HPV11: HE574705.1
 - - hg38 22 31802255 31802255 q12.3 DEPDC5, ENSG00000285404 Tumor Cervial Cancer HPV-capture sequencing 37212325 2023 Curated
TVIS20029571 Human Papillomavirus Muliple HPV6: FR751337.1, HPV82: AF293961.1, HPV69: AB027020.1, HPV68: FR751039.1, HPV66: EF177191.1, HPV59: EU918767.1, HPV58: HQ537777.1, HPV56: EF177181.1, HPV52: HQ537751.1, HPV45: EF202167.1, HPV39: M62849.1, HPV35: HQ537730.1, HPV33: HQ537688.1, HPV31: HQ537687.1, HPV18: AY262282.1, HPV16: NC_001526.2, HPV11: HE574705.1
 - - hg38 22 33871445 33871445 q12.3 LARGE1 Tumor Cervial Cancer HPV-capture sequencing 37212325 2023 Curated