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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004403 Human Papillomavirus HPV16 NC_001526.1
 1403 - GRCh37.p5 3 190065084 190065084 q28 P3H2 Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004424 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 3 189849531 189849531 q28 TP63 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20005069 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 3 171068853 171079657 q26.2 TNIK, ENSG00000286856 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005070 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 3 171079874 171080219 q26.2 TNIK, ENSG00000286856 Tumor Squamous-cell carcinoma Whole-genome sequencing 24390348 2014 VISDB1.0
TVIS20005080 Human Papillomavirus HPV18 Not given - - hg19 3 177024174 177037155 q26.32 TBL1XR1 Tumor Adenocarcinoma Whole-genome sequencing 24390348 2014 VISDB1.0
TVIS20005085 Human Papillomavirus HPV45 Not given - - hg19 3 13778470 13778700 p25.1 - Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005091 Human Papillomavirus HPV18 Not given - - hg19 3 153163454 153219532 q25.2 RAP2B, RN7SL300P, ENSG00000289885 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005092 Human Papillomavirus HPV18 Not given - - hg19 3 153219309 153219533 q25.2 ENSG00000289885 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005093 Human Papillomavirus HPV18 Not given - - hg19 3 153219298 153219532 q25.2 ENSG00000289885 Tumor Adenocarcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005094 Human Papillomavirus HPV18 Not given - - hg19 3 153219310 153219530 q25.2 ENSG00000289885 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0