Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16391 | TVIS20004403 | Human Papillomavirus | HPV16 |
NC_001526.1 |
1403 | - | GRCh37.p5 | chr3 | 190065084 | 190065084 | q28 | P3H2 | Tumor | Oropharyngeal squamous cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 24586376 | 2014 | VISDB1.0 |
| 16392 | TVIS20004424 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr3 | 189849531 | 189849531 | q28 | TP63 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 16393 | TVIS20005069 | Human Papillomavirus | HPV16 |
HQ644271.1 |
- | - | hg19 | chr3 | 171068853 | 171079657 | q26.2 | TNIK, ENSG00000286856 | Tumor | Squamous-cell carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 16394 | TVIS20005070 | Human Papillomavirus | HPV16 |
HQ644271.1 |
- | - | hg19 | chr3 | 171079874 | 171080219 | q26.2 | TNIK, ENSG00000286856 | Tumor | Squamous-cell carcinoma | Whole-genome sequencing | 24390348 | 2014 | VISDB1.0 |
| 16395 | TVIS20005080 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr3 | 177024174 | 177037155 | q26.32 | TBL1XR1 | Tumor | Adenocarcinoma | Whole-genome sequencing | 24390348 | 2014 | VISDB1.0 |
| 16396 | TVIS20005085 | Human Papillomavirus | HPV45 | Not given | - | - | hg19 | chr3 | 13778470 | 13778700 | p25.1 | - | Tumor | Squamous-cell carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 16397 | TVIS20005091 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr3 | 153163454 | 153219532 | q25.2 | RAP2B, RN7SL300P, ENSG00000289885 | Tumor | Squamous-cell carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 16398 | TVIS20005092 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr3 | 153219309 | 153219533 | q25.2 | ENSG00000289885 | Tumor | Squamous-cell carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 16399 | TVIS20005093 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr3 | 153219298 | 153219532 | q25.2 | ENSG00000289885 | Tumor | Adenocarcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 16400 | TVIS20005094 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr3 | 153219310 | 153219530 | q25.2 | ENSG00000289885 | Tumor | Squamous-cell carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
