Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004607 Human Papillomavirus HPV16 NC_001526.2
 1048 1072 hg19 3 82226566 82226588 p12.2 LINC02008 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004631 Human Papillomavirus HPV16 NC_001526.2
 6636 6660 hg19 3 81785778 81785808 p12.2 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004636 Human Papillomavirus HPV16 NC_001526.2
 7591 7656 hg19 3 81992109 81992131 p12.2 LINC02008 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004638 Human Papillomavirus HPV16 NC_001526.2
 7591 7656 hg19 3 81992119 81992131 p12.2 LINC02008 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS10019975 Hepatitis B virus - NC_003977.1
 - - hg19 3 3705561 3705722 p26.2 SUMF1 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS30003457 Human Immunodeficiency Virus - Not given - - hg19 3 1158456 1158456 p26.3 CNTN6 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003458 Human Immunodeficiency Virus - Not given - - hg19 3 3766314 3766314 p26.2 SUMF1 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003459 Human Immunodeficiency Virus - Not given - - hg19 3 4734280 4734280 p26.1 ITPR1 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003460 Human Immunodeficiency Virus - Not given - - hg19 3 12367457 12367457 p25.2 PPARG Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003461 Human Immunodeficiency Virus - Not given - - hg19 3 12373206 12373206 p25.2 PPARG Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0