Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS44015505 Human T-lymphotropic Virus - Not given - - hg19 5 43400049 43400049 p12 CCL28 Nontumor Adult T-cell leukemia High throughput sequenicng 24735963 2014 VISDB1.0
TVIS20004426 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 5 70155501 70155501 q13 ENSG00000300022 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS10014881 Hepatitis B virus - NC_003977.1
 94 285 GRCh37.p10 5 1295444 1295719 p15.33 ENSG00000300381 Cell line Hepatocellular carcinoma PCR and Sanger sequencing 24582836 2014 VISDB1.0
TVIS20004644 Human Papillomavirus HPV18 NC_001357.1
 189 206 hg19 5 57538854 57538885 q11.2 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004645 Human Papillomavirus HPV18 NC_001357.1
 351 382 hg19 5 59481635 59481664 q11.2 PDE4D Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004646 Human Papillomavirus HPV18 NC_001357.1
 379 404 hg19 5 59499391 59499420 q11.2 PDE4D Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004647 Human Papillomavirus HPV18 NC_001357.1
 379 420 hg19 5 59499387 59499420 q11.2 PDE4D Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004648 Human Papillomavirus HPV18 NC_001357.1
 2475 2501 hg19 5 57461357 57461383 q11.2 RMEL3 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004650 Human Papillomavirus HPV18 NC_001357.1
 3464 3496 hg19 5 59477878 59477905 q11.2 PDE4D Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004651 Human Papillomavirus HPV18 NC_001357.1
 4225 4255 hg19 5 57534396 57534419 q11.2 RMEL3 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0