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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004963 Human Papillomavirus HPV18 NC_001357.1
 3535 - hg19 chr6 - - p25.1 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24418928 2014 VISDB1.0
TVIS20005057 Human Papillomavirus HPV52 HQ537731.1
 - - hg19 chr6 108541654 108542276 q21 ENSG00000287044 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20004565 Human Papillomavirus HPV16 NC_001526.2
 2246 2280 hg19 chr6 45691417 45691442 p21.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004572 Human Papillomavirus HPV16 NC_001526.2
 3704 3728 hg19 chr6 45691360 45691384 p21.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004611 Human Papillomavirus HPV16 NC_001526.2
 1464 1482 hg19 chr6 37175741 37175774 p21.2 ENSG00000295829 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004621 Human Papillomavirus HPV16 NC_001526.2
 4923 4952 hg19 chr6 37161250 37161272 p21.2 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004622 Human Papillomavirus HPV16 NC_001526.2
 4970 5004 hg19 chr6 36910796 36910839 p21.2 C6orf89 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004623 Human Papillomavirus HPV16 NC_001526.2
 5001 5028 hg19 chr6 37167442 37167468 p21.2 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004624 Human Papillomavirus HPV16 NC_001526.2
 4970 5109 hg19 chr6 36910796 36910817 p21.2 C6orf89 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004625 Human Papillomavirus HPV16 NC_001526.2
 5255 5278 hg19 chr6 37196745 37196776 p22.1 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
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